Newark finished in first place for both halves of the season, so was declared champion. The NNL and the NAL faced each other in the Negro World Series at the end of the season to determine an overall champion.
TEAMWLPctGB
y 1946 Newark Eagles LogoNewark   5020.708-
1946 Baltimore Elite Giants LogoElite Giants 3936.51913.5
1946 Homestead Grays LogoHomestead 3634.51414.0
1946 New York Cubans LogoNY Cubans 3433.50714.5
1946 Philadelphia Stars LogoPhi. Stars 3235.47816.5
1946 New York Black Yankees LogoNY Black Yankees 1245.21131.5