| 1990 | 1 | 1 | Chipper Jones | SS | The Bolles School (Jacksonville, FL) | Atlanta | |
| 1990 | 1 | 2 | Tony Clark | OF | Christian (El Cajon, CA) | Detroit | |
| 1990 | 1 | 3 | Mike Lieberthal | C | Westlake High School (Westlake Village,CA) | Philadelphia | |
| 1990 | 1 | 4 | Alex Fernandez | P | Miami-Dade College | Chi. White Sox | |
| 1990 | 1 | 5 | Kurt Miller | P | West (Bakersfield, CA) | Pittsburgh | |
| 1990 | 1 | 6 | Marc Newfield | 1B | Marina High School (Huntington Beach, CA) | Seattle | |
| 1990 | 1 | 7 | Dan Wilson | C | University of Minnesota | Cincinnati | |
| 1990 | 1 | 8 | Tim Costo | SS | University of Iowa | Cleveland | |
| 1990 | 1 | 9 | Ron Walden | P | Blanchard High School (Blanchard, OK) | LA Dodgers | |
| 1990 | 1 | 10 | Carl Everett | OF | Hillsborough High School (Tampa, FL) | NY Yankees | |
| 1990 | 1 | 11 | Shane Andrews | 3B | Montreal | ||
| 1990 | 1 | 12 | Todd Ritchie | P | Duncanville High School (Duncanville, TX) | Minnesota | |
| 1990 | 1 | 13 | Donovan Osborne | P | UNLV | StL Cardinals | |
| 1990 | 1 | 14 | Todd Van Poppel | P | Martin (Arlington, TX) | Oakland | |
| 1990 | 1 | 15 | Adam Hyzdu | OF | Moeller High School (Cincinnati, OH) | San Francisco | |
| 1990 | 1 | 16 | Dan Smith | P | Creighton University | Texas | |
| 1990 | 1 | 17 | Jeromy Burnitz | OF | Oklahoma State University | NY Mets | |
| 1990 | 1 | 18 | Aaron Holbert | SS | David Starr Jordan (Long Beach, CA) | StL Cardinals | |
| 1990 | 1 | 19 | Eric Christopherson | OF | San Diego State University | San Francisco | |
| 1990 | 1 | 20 | Mike Mussina | P | Stanford University | Baltimore | |
| 1990 | 1 | 21 | Tom Nevers | SS | Edina (Edina,MN) | Houston | |
| 1990 | 1 | 22 | Steve Karsay | P | Christ the King (Flushing, NY) | Toronto | |
| 1990 | 1 | 23 | Lance Dickson | P | University of Arizona | Chi. Cubs | |
| 1990 | 1 | 24 | Rondell White | OF | Jones County High School (Gray, GA) | Montreal | |
| 1990 | 1 | 25 | Robbie Beckett | P | McCallum (Austin, TX) | San Diego | |
| 1990 | 1 | 26 | Don Peters | P | University of St. Francis | Oakland | |
| 1990 | 1 | 27 | Mike Zimmerman | P | University of South Alabama | Pittsburgh | |
| 1990 | 1 | 28 | Gabe White | P | Sebring (Sebring,FL) | Montreal | |
| 1990 | 1 | 29 | Midre Cummings | OF | Miami Edison High School (Miami, FL) | Minnesota | |
| 1990 | 1 | 30 | Paul Elis | C | UCLA | StL Cardinals | |
| 1990 | 1 | 31 | Brian Williams | P | University of South Carolina | Houston | |
| 1990 | 1 | 32 | Scott Sanders | P | Nicholls State University | San Diego | |
| 1990 | 1 | 33 | Marcus Jensen | C-P | Skyline High School (Oakland, CA) | San Francisco | |
| 1990 | 1 | 34 | David Zancanaro | P | UCLA | Oakland | |
| 1990 | 1 | 35 | Stan Spencer | P | Stanford University | Montreal | |
| 1990 | 1 | 36 | Kirk Dressendorfer | P | University of Texas | Oakland | |
| 1990 | 1 | 37 | Ben Van Ryn | P | East Noble (Kendallville,IN) | Montreal | |
| 1990 | 1 | 38 | Anthony Manahan | SS | Arizona State University | Seattle | |
| 1990 | 1 | 39 | Sam Hence | OF | Stone County (Wiggins,MS) | Cleveland | |
| 1990 | 1 | 40 | Stan Robertson | OF | Plainview (Plainview,TX) | Montreal | |
| 1990 | 2 | 41 | Frankie Rodriguez | P-SS | Eastern District High School (Brooklyn, NY) | Boston | |
| 1990 | 2 | 42 | Curtis Shaw | P | University of Kansas | Oakland | |
| 1990 | 2 | 43 | LaRue Baber | OF | Grant (Sacramento, CA) | Milwaukee | |
| 1990 | 2 | 44 | Gary Mota | OF | Fullerton College | Houston | |
| 1990 | 2 | 45 | Robert Eenhoorn | SS | Davidson College | NY Yankees | |
| 1990 | 2 | 46 | Darrell Whitmore | OF | West Virginia University | Cleveland | |
| 1990 | 2 | 47 | Mike Schiefelbein | P | Chatfield Senior High School (Littleton, CO) | Texas | |
| 1990 | 2 | 48 | Aaron Ledesma | SS | Chabot College | NY Mets | |
| 1990 | 2 | 49 | Michael Hardge | SS | Ellison (Killeen,TX) | Montreal | |
| 1990 | 2 | 50 | Tavo Alvarez | P | Tucson High School (Tucson, AZ) | Montreal | |
| 1990 | 2 | 51 | Erik Schullstrom | P | California State University, Fresno | Baltimore | |
| 1990 | 2 | 52 | Jose Prado | P | Coral Gables High School (Coral Gables,FL) | San Francisco | |
| 1990 | 2 | 53 | Chris Martin | SS | Pepperdone University | Montreal | |
| 1990 | 2 | 54 | Chris Weinke | 3B | Cretin-Derham Hall (St. Paul, MN) | Toronto | |
| 1990 | 2 | 55 | Ryan Hawblitzel | P | John I. Leonard (Greenacres,FL) | Chi. Cubs | |
| 1990 | 2 | 56 | Gary Hust | OF | Petal (Petal,MS) | Oakland | |
| 1990 | 2 | 57 | Phil Leftwich | P | Radford University | California | |
| 1990 | 2 | 58 | Ron Caridad | P | Westminster Christian School (Miami, FL) | Minnesota | |
| 1990 | 2 | 59 | Keith Grunewald | SS | Walton High School (Marietta, GA) | Detroit | |
| 1990 | 2 | 60 | Tim Schweitzer | P | Reedsport (Reedsport,OR) | Philadelphia | |
| 1990 | 2 | 61 | Bob Wickman | P | University of Wisconsin-Whitewater | Chi. White Sox | |
| 1990 | 2 | 62 | Keith Gordon | SS | Wright State University | Cincinnati | |
| 1990 | 2 | 63 | Pat Bryant | OF | Cleveland High School (Reseda,CA) | Cleveland | |
| 1990 | 2 | 64 | Chris Haney | P | University of North Carolina-Charlotte | Montreal | |
| 1990 | 2 | 65 | Eric Helfand | C | Arizona State University | Oakland | |
| 1990 | 2 | 66 | Jay Owens | C | Middle Tennessee State University | Minnesota | |
| 1990 | 2 | 67 | Eric Maloney | P | Carmel High School (Carmel,IN) | Chi. White Sox | |
| 1990 | 2 | 68 | Leroy Williams | SS | East St. John (Reserve,LA) | LA Dodgers | |
| 1990 | 2 | 69 | Jeff Williams | P | Wichita State University | Baltimore | |
| 1990 | 2 | 70 | Joey Roselli | P | Bishop Alemany High School (Mission Hills, CA) | San Francisco | |
| 1990 | 2 | 71 | Tim Hyers | 1B-OF | Newton High School (Covington,GA) | Toronto | |
| 1990 | 2 | 72 | Troy Bradford | P | University of Arizona | Chi. Cubs | |
| 1990 | 2 | 73 | Scott Freeman | P | University of Wyoming | LA Dodgers | |
| 1990 | 3 | 77 | Robert Ellis | P | Panola College | Chi. White Sox | |
| 1990 | 3 | 79 | Dave Fleming | P | University of Georgia | Seattle | |
| 1990 | 3 | 81 | Jason Hardtke | SS | Leland High School (San Jose, CA) | Cleveland | |
| 1990 | 3 | 85 | Richie Becker | OF | West Aurora (Aurora, IL) | Minnesota | |
| 1990 | 3 | 86 | Marc Ronan | C-OF | Florida State University | StL Cardinals | |
| 1990 | 3 | 88 | Chris Hatcher | OF | University of Iowa | Houston | |
| 1990 | 3 | 90 | Micah Franklin | SS | Lincoln High School (San Francisco, CA) | NY Mets | |
| 1990 | 3 | 91 | Walt McKeel | OF | Greene County Central (Snow Hill,NC) | Boston | |
| 1990 | 3 | 93 | Mike Thomas | OF | Richmond High School (Rockingham,NC) | Baltimore | |
| 1990 | 3 | 94 | Rich Huisman | P | Lewis University | San Francisco | |
| 1990 | 3 | 95 | Felipe Crespo | OF | Notre Dame High School (Caguas,PR) | Toronto | |
| 1990 | 4 | 103 | James Baldwin | P | Pinecrest (Southern Pines,NC) | Chi. White Sox | |
| 1990 | 4 | 108 | Mike Busch | 1B | Iowa State University | LA Dodgers | |
| 1990 | 4 | 109 | Kirt Ojala | P | University of Michigan | NY Yankees | |
| 1990 | 4 | 110 | Jeff Barry | OF | San Diego State University | Montreal | |
| 1990 | 4 | 120 | Mike Myers | P | Iowa State University | San Francisco | |
| 1990 | 4 | 121 | Howard Battle | OF | Mercy Cross (Biloxi,MS) | Toronto | |
| 1990 | 4 | 123 | Garret Anderson | OF | Kennedy High School (Granada Hills, CA) | California | |
| 1990 | 5 | 126 | Joe Ayrault | C | Sarasota High School (Sarasota, FL) | Atlanta | |
| 1990 | 5 | 127 | Shannon Withem | P | Willow Run (Ypsilanti, MI) | Detroit | |
| 1990 | 5 | 129 | Ray Durham | 2B | Harding University (Charlotte, NC) | Chi. White Sox | |
| 1990 | 5 | 131 | Bret Boone | 2B | University of Southern California | Seattle | |
| 1990 | 5 | 133 | Oscar Munoz | P | University of Miami | Cleveland | |
| 1990 | 5 | 137 | Brent Brede | OF | Wesclin (Trenton,IL) | Minnesota | |
| 1990 | 5 | 139 | Duane Singleton | OF | McKee Vo Tech (Staten Island, NY) | Milwaukee | |
| 1990 | 5 | 141 | Jon Shave | SS | Mississippi State University | Texas | |
| 1990 | 5 | 145 | Bob Chouinard | P | Forest Grove (Forest Grove,OR) | Baltimore | |
| 1990 | 5 | 149 | Doug Creek | P | Georgia Institute of Technology | California | |
| 1990 | 6 | 157 | Mike Hampton | P | Crystal River (Crystal River,FL) | Seattle | |
| 1990 | 6 | 158 | Steve Gibralter | OF | Duncanville High School (Duncanville, TX) | Cincinnati | |
| 1990 | 6 | 159 | Paul Bako | C | Lafayette High School (Lafayette, LA) | Cleveland | |
| 1990 | 6 | 161 | Sam Militello | P | University of Tampa | NY Yankees | |
| 1990 | 6 | 165 | Tom McGraw | P | Washington State University | Milwaukee | |
| 1990 | 6 | 169 | Gar Finnvold | P | Florida State University | Boston | |
| 1990 | 6 | 175 | Troy Percival | C | University of California-Riverside | California | |
| 1990 | 6 | 177 | Creighton Gubanich | C | Phoenixville Area (Phoenixville,PA) | Oakland | |
| 1990 | 7 | 178 | Ed Giovanola | SS | Santa Clara University | Atlanta | |
| 1990 | 7 | 180 | Joel Adamson | P | Cerritos College | Philadelphia | |
| 1990 | 7 | 182 | Kevin Young | 3B | University of Southern Mississippi | Pittsburgh | |
| 1990 | 7 | 183 | Kevin King | P | University of Oklahoma | Seattle | |
| 1990 | 7 | 185 | David Bell | 3B | Moeller High School (Cincinnati, OH) | Cleveland | |
| 1990 | 7 | 187 | Jalal Leach | OF | Pepperdone University | NY Yankees | |
| 1990 | 7 | 190 | Scott Baker | P | Taft College | StL Cardinals | |
| 1990 | 7 | 193 | Terry Burrows | P | McNeese State University | Texas | |
| 1990 | 7 | 194 | Pete Walker | P | University of Connecticut | NY Mets | |
| 1990 | 7 | 198 | Greg Norton | SS | Bishop O'Dowd High School (Oakland, CA) | San Francisco | |
| 1990 | 7 | 199 | Scott Brow | P | University of Washington | Toronto | |
| 1990 | 8 | 209 | John Cummings | P | University of Southern California | Seattle | |
| 1990 | 8 | 210 | Larry Luebbers | P | University of Kentucky | Cincinnati | |
| 1990 | 8 | 215 | James Mouton | OF | St. Mary's College of California | Minnesota | |
| 1990 | 8 | 219 | Steve Dreyer | P | University of Northern Iowa | Texas | |
| 1990 | 8 | 220 | Raul Casanova | C | NY Mets | ||
| 1990 | 8 | 224 | Kevin McGehee | P | Louisiana Tech University | San Francisco | |
| 1990 | 8 | 225 | Paul Menhart | P | Western Carolina University | Toronto | |
| 1990 | 8 | 228 | Phil Hiatt | 3B | Louisiana Tech University | Kansas City | |
| 1990 | 9 | 230 | Brian Kowitz | OF | Clemson University | Atlanta | |
| 1990 | 9 | 232 | Derrick White | 3B | Santa Rosa Junior College | Philadelphia | |
| 1990 | 9 | 234 | Rich Robertson | P | Texas A&M University | Pittsburgh | |
| 1990 | 9 | 242 | Terry Bradshaw | OF | Norfolk State University | StL Cardinals | |
| 1990 | 9 | 246 | Fernando Vina | 2B | Arizona State University | NY Mets | |
| 1990 | 9 | 251 | Huck Flener | P | Cal State Fullerton | Toronto | |
| 1990 | 10 | 256 | Tony Graffanino | SS | East Islip (Islip Terrace,NY) | Atlanta | |
| 1990 | 10 | 268 | Mark Smith | OF-P | University of Texas | StL Cardinals | |
| 1990 | 10 | 270 | Brian Boehringer | P | UNLV | Houston | |
| 1990 | 10 | 271 | Rusty Greer | OF | University of Montevallo | Texas | |
| 1990 | 10 | 275 | Damon Buford | 2B-OF | University of Southern California | Baltimore | |
| 1990 | 10 | 281 | Ernie Young | OF | Lewis University | Oakland | |
| 1990 | 11 | 282 | Phil Stidham | P | University of Arkansas | Atlanta | |
| 1990 | 11 | 284 | Gary Bennett | C | Waukegan East (Waukegan,IL) | Philadelphia | |
| 1990 | 11 | 298 | Darren Dreifort | OF | Wichita Heights (Wichita, KS) | NY Mets | |
| 1990 | 11 | 300 | Jay Powell | P-3B | West Lauderdale High School (Collinsville, MS) | San Diego | |
| 1990 | 12 | 308 | Brian Bark | P-OF | North Carolina State University | Atlanta | |
| 1990 | 12 | 311 | Jimmy Hurst | OF | Central High School (Tuscaloosa, AL) | Chi. White Sox | |
| 1990 | 12 | 314 | John Roper | P | Hoke County (Raeford,NC) | Cincinnati | |
| 1990 | 12 | 319 | Pat Meares | 3B | Wichita State University | Minnesota | |
| 1990 | 12 | 321 | Marshall Boze | P | Southwestern Community College | Milwaukee | |
| 1990 | 12 | 322 | Jeff Ball | 3B | San Jose State University | Houston | |
| 1990 | 12 | 330 | Pedro Valdes | P | Chi. Cubs | ||
| 1990 | 12 | 332 | Rod Myers | P | University of Wisconsin | Kansas City | |
| 1990 | 13 | 335 | Charlie Greene | C | Miami-Dade College | Detroit | |
| 1990 | 13 | 337 | Rod Bolton | P | University of Kentucky | Chi. White Sox | |
| 1990 | 13 | 338 | Brian Shouse | P | Bradley University | Pittsburgh | |
| 1990 | 13 | 346 | Tom Urbani | P | Long Beach State University | StL Cardinals | |
| 1990 | 13 | 348 | Ray Montgomery | OF | Fordham University | Houston | |
| 1990 | 13 | 349 | David Hulse | OF | Schreiner University | Texas | |
| 1990 | 13 | 357 | Ryan Hancock | P | Monta Vista (Cupertino,CA) | California | |
| 1990 | 14 | 361 | Ben Blomdahl | P | Riverside Community College | Detroit | |
| 1990 | 14 | 362 | Mike Williams | P | Virginia Tech | Philadelphia | |
| 1990 | 14 | 364 | Jeff McCurry | P | San Jacinto College | Pittsburgh | |
| 1990 | 14 | 371 | Jeff Granger | P | Orangefield (Orangefield,TX) | Minnesota | |
| 1990 | 14 | 378 | Scott Frederickson | P | University of Texas | San Diego | |
| 1990 | 15 | 390 | Rick White | P | West Kentucky Community and Technical College | Pittsburgh | |
| 1990 | 15 | 402 | Steve Soderstrom | P | Turlock High School (Turlock, CA) | NY Mets | |
| 1990 | 15 | 409 | Jermaine Allensworth | SS | Madison Heights (Anderson,IN) | California | |
| 1990 | 16 | 417 | Jim Converse | P | Seattle | ||
| 1990 | 16 | 418 | Shane Halter | SS | Seminole State College of Florida | Cincinnati | |
| 1990 | 16 | 421 | Ricky Ledee | OF | NY Yankees | ||
| 1990 | 16 | 429 | Erik Plantenberg | P | San Diego State University | Boston | |
| 1990 | 16 | 432 | Rikkert Faneyte | OF | Miami-Dade College | San Francisco | |
| 1990 | 16 | 433 | Mike Coolbaugh | SS | Roosevelt High School (San Antonio, TX) | Toronto | |
| 1990 | 16 | 437 | Doug Johns | P | University of Virginia | Oakland | |
| 1990 | 17 | 445 | Dave Mlicki | P | Oklahoma State University | Cleveland | |
| 1990 | 17 | 446 | Stephen Mintz | OF | Mount Olive College | LA Dodgers | |
| 1990 | 17 | 454 | Brian Daubach | OF | Belleville (Belleville,IL) | NY Mets | |
| 1990 | 17 | 456 | Matt Mieske | OF | Western Michigan University | San Diego | |
| 1990 | 17 | 462 | Raul Gonzalez | 3B-OF | Kansas City | ||
| 1990 | 18 | 464 | Michael Potts | P | Gordon College | Atlanta | |
| 1990 | 18 | 471 | Stephen Gajkowski | P | Bellevue Community College | Cleveland | |
| 1990 | 18 | 487 | Mark Dalesandro | C | University of Illinois | California | |
| 1990 | 19 | 495 | Albert Lopez | P | Mesa Community College | Seattle | |
| 1990 | 20 | 518 | Marvin Benard | OF | Los Angeles Harbor College | Philadelphia | |
| 1990 | 20 | 520 | Mark Johnson | 1B | Dartmouth College | Pittsburgh | |
| 1990 | 20 | 522 | Marc Valdes | P | Jesuit High School (Tampa, FL) | Cincinnati | |
| 1990 | 20 | 525 | Kevin Jordan | 2B | University of Nebraska | NY Yankees | |
| 1990 | 20 | 527 | Damian Miller | C | Viterbo University | Minnesota | |
| 1990 | 20 | 531 | Tim Kubinski | P | San Luis Obispo (San Luis Obispo,CA) | Texas | |
| 1990 | 20 | 539 | R.J. Forbes | 2B | Wichita State University | California | |
| 1990 | 21 | 544 | Robert Waszgis | OF | Fort Scott Community College | Philadelphia | |
| 1990 | 21 | 553 | Ed Guardado | P | San Joaquin Delta College | Minnesota | |
| 1990 | 21 | 565 | Ken Edenfield | P | Western Kentucky University | California | |
| 1990 | 22 | 577 | Andy Pettitte | P | Deer Park (Deer Park,TX) | NY Yankees | |
| 1990 | 22 | 586 | Jon Ratliff | P | Liverpool Central (Clay,NY) | San Diego | |
| 1990 | 22 | 587 | Scott McClain | P | Baltimore | ||
| 1990 | 22 | 593 | Islay Molina | C | Columbus High School (Miami, FL) | Oakland | |
| 1990 | 23 | 594 | Matthew Wagner | P | Cedar Falls (Cedar Falls,IA) | Atlanta | |
| 1990 | 23 | 603 | Thomas Wilson | OF | Fullerton College | NY Yankees | |
| 1990 | 23 | 608 | Jason Varitek | C | Lake Brantley (Altamonte Springs,FL) | Houston | |
| 1990 | 23 | 619 | Tanyon Sturtze | P | Quinsigamond Community College | Oakland | |
| 1990 | 24 | 624 | Keith Osik | C-3B | Louisiana State University | Pittsburgh | |
| 1990 | 24 | 628 | Michael Mimbs | P | Mercer University | LA Dodgers | |
| 1990 | 24 | 629 | Jorge Posada | SS | NY Yankees | ||
| 1990 | 24 | 632 | Duff Brumley | P | Cleveland State Community College | StL Cardinals | |
| 1990 | 24 | 638 | Jay Gainer | 1B | University of South Alabama | San Diego | |
| 1990 | 25 | 655 | Malt Dunbar | P | Florida State University | NY Yankees | |
| 1990 | 25 | 661 | Matt Whiteside | P | Arkansas State University | Texas | |
| 1990 | 25 | 664 | Lance Painter | P | University of Wisconsin | San Diego | |
| 1990 | 26 | 686 | Jim Dougherty | P | University of North Carolina | Houston | |
| 1990 | 26 | 689 | Les Norman | OF | University of St. Francis | Boston | |
| 1990 | 28 | 733 | Shane Spencer | OF | Granite Hills High School (El Cajon, CA) | NY Yankees | |
| 1990 | 28 | 734 | Billy Brewer | P | Dallas Baptist University | Montreal | |
| 1990 | 29 | 764 | Bret Hemphill | OF | Cupertino (Cupertino,CA) | Houston | |
| 1990 | 29 | 766 | William Brunson | P | Eastfield College | NY Mets | |
| 1990 | 29 | 770 | Lou Pote | P | Kishwaukee College | San Francisco | |
| 1990 | 30 | 790 | Chris Singleton | OF | Pinole Valley (Pinole,CA) | Houston | |
| 1990 | 30 | 795 | Robin Jennings | OF | Annandale (Annandale,VA) | Baltimore | |
| 1990 | 30 | 800 | Brian Bevil | P | Angelina College | Kansas City | |
| 1990 | 31 | 817 | Scott Erickson | P | University of Nebraska-Kearney | Texas | |
| 1990 | 31 | 819 | Jeffrey Johnson | P | Fresno City College | Boston | |
| 1990 | 32 | 836 | Anthony Rodriguez | C | - | LA Dodgers | |
| 1990 | 32 | 844 | Mike Holtz | P | Central Cambria (Ebensburg,PA) | NY Mets | |
| 1990 | 32 | 851 | David Berg | 2B | Sacramento City College | California | |
| 1990 | 33 | 873 | James Dedrick | P | University of Southern California | Baltimore | |
| 1990 | 33 | 877 | Jeff Ball | P | University of Hawaii | California | |
| 1990 | 35 | 906 | Scott Watkins | P | Seminole State College of Florida | Atlanta | |
| 1990 | 35 | 915 | Kevin Ohme | P | Indian River State College | NY Yankees | |
| 1990 | 35 | 929 | Brad Holman | P | Auburn University | Kansas City | |
| 1990 | 36 | 934 | Jason Bere | P | Middlesex Community College | Chi. White Sox | |
| 1990 | 36 | 943 | Kevin Morgan | 2B | Southeastern Louisiana University | StL Cardinals | |
| 1990 | 36 | 948 | Tim Davis | 2B | Southern Illinois University | Boston | |
| 1990 | 37 | 977 | Ricardo Jordan | P | Miami-Dade South Community College | Toronto | |
| 1990 | 37 | 981 | Todd Revenig | P | Minnesota State University-Mankato | Oakland | |
| 1990 | 38 | 990 | Brady Raggio | P | San Ramon Valley (Danville,CA) | LA Dodgers | |
| 1990 | 38 | 996 | Jose Flores | SS | Houston | ||
| 1990 | 38 | 998 | Andrew Lorraine | P | William S. Hart High School (Newhall, CA) | NY Mets | |
| 1990 | 39 | 1006 | Jason Wood | SS | Fresno City College | Atlanta | |
| 1990 | 39 | 1014 | Mark Sweeney | OF | University of Maine | LA Dodgers | |
| 1990 | 39 | 1015 | Mike Heathcott | P | Creighton University | NY Yankees | |
| 1990 | 39 | 1024 | Jon Nunnally | C | Hargrave Military Academy (Chatham,VA) | Baltimore | |
| 1990 | 41 | 1056 | Matt Skrmetta | P | Satellite (Satellite Beach,FL) | Chi. White Sox | |
| 1990 | 41 | 1057 | Javier Martinez | SS | Pittsburgh | ||
| 1990 | 41 | 1061 | John Wasdin | P | Godby (Tallahassee,FL) | NY Yankees | |
| 1990 | 41 | 1063 | Brian Raabe | 2B | University of Minnesota | Minnesota | |
| 1990 | 42 | 1093 | Roberto Duran | OF | Seward Park (New York, NY) | Toronto | |
| 1990 | 43 | 1108 | Chris Turner | 3B-of | Western Kentucky University | StL Cardinals | |
| 1990 | 45 | 1145 | Allen Battle | OF | University of South Alabama | Chi. White Sox | |
| 1990 | 45 | 1155 | Ricardo Otero | OF | NY Mets | ||
| 1990 | 45 | 1157 | Travis Baptist | P | Hillsboro High School (Hillsboro, OR) | Toronto | |
| 1990 | 47 | 1184 | William Zerbe | P | Gaither (Tampa, FL) | Chi. White Sox | |
| 1990 | 48 | 1215 | Martin Malloy | SS-2B | Trenton (Trenton,FL) | California | |
| 1990 | 49 | 1232 | Alan Benes | P | Lake Forest (Lake Forest,IL) | San Diego | |
| 1990 | 50 | 1250 | Rick Helling | P | Kishwaukee College | NY Mets | |
| 1990 | 51 | 1260 | Carlos Crawford | P | Montreat College | Cleveland | |
| 1990 | 52 | 1274 | Willie Adams | P | La Serna High School (Whittier, CA) | Detroit | |
| 1990 | 53 | 1301 | Bart Evans | P | Three Rivers Community College | StL Cardinals | |
| 1990 | 53 | 1303 | Joe Dawley | P | Canyon Springs (Moreno Valley, CA) | Texas | |
| 1990 | 53 | 1304 | Alan Levme | P | Southern Illinois University | San Diego | |
| 1990 | 54 | 1308 | Kelly Wunsch | P | Bellaire (Bellaire,TX) | Atlanta | |
| 1990 | 54 | 1314 | Todd Williams | P | Onondaga Community College | LA Dodgers | |
| 1990 | 54 | 1323 | Lyle Mouton | OF | Louisiana State University | Kansas City | |
| 1990 | 56 | 1339 | Willie Morales | C | Tucson High School (Tucson, AZ) | Detroit | |
| 1990 | 63 | 1403 | Fausto Abad | OF | Jupiter Community High School (Jupiter, FL) | LA Dodgers | |
| 1990 | 65 | 1413 | Joseph Long | P | Citrus College | NY Yankees | |
| 1990 | 72 | 1437 | Danny Rios | P | Monsignor Pace High School (Miami, FL) | NY Yankees | |
| 1990 | 74 | 1444 | William Adams | OF | John Jay High School (San Antonio, TX) | Houston | |
| 1990 | 76 | 1447 | Travis Driskill | P | Anderson (Austin, TX) | Houston | |
| 1990 | 83 | 1454 | Daniel Young | P | Cannon County (Woodbury,TN) | Houston | |
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I sincerely appreciate the research work, and the information being shared. It is important and interesting history.